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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919730.1_cds_XP_016468913.1_61502
CDS Infomation

[gene=LOC107791373] [db_xref=GeneID:107791373] [protein=methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial-like isoform X3] [protein_id=XP_016468913.1] [location=join(40706..40744,41520..41591,41678..41839,41923..42001,42401..42555,42849..42912,44162..44241,44507..44572,45313..45366,46798..46949,48232..48322,48524..48604,49446..49523,49612..49647,49726..49769,49855..49936,50605..50695,50788..51206)] [gbkey=CDS]
Sequence

ATGGCTACTGAGCCTTCTTGGAGGAAACGCTGTCCTCCGAGGAACCCTAATCTTATTGGT
GGTAGATTTGTTGACTCGCAATCATCTGCATCCGTTGACGTACTAAACCCTGCAACACAA
CAAGTGGTCTCACAAGTTCCTTTAAGTACGGGTGAAGAACTTAAGGCTGCTGTGTTTGAA
GCAAAAAGAGCTTTCCCATTGTGGCAGCACACACCAGTTACAACCCGTCAGCGGATCATG
TTCAAGCTTCAAGAACTTATCCAGAGAGATATTGATAAGCTTGCTTTCGCCATAGCTACT
GAGCAGGGTAAGACTTTGAAGGATGCATACAGCGAAGTGCAACGTGGGCTAGAAATAGTG
GAGTGTGCTTGTGGTGGGGCAGCACTGCAGACAGGGGAGTTTGTTTCAAACATGTCAAAT
GGAATCGATACTTTTAGTATCAGAGAGCCTCTTGGAGTTTGTGCAGGAATATGCCCATTC
ACCTTCCCTGCTATGATTCCATTGTGGATGTTCCATGTTGCGATTTCATGTGGTAATACA
TATATTCTAAAGCCATCTGAGAAATCTCCAGGAGCTTGCAAGATACTAGCAGAATTAGTA
TTGGAAGCTGGTTTGCCTAATGGTGTCTTAAATATTATTCATGGCACCAATGACATTGTC
AATGCCATCTGTGATGATGACGATATTGAAGTTGTGTCTTTTGTTGGTTCTGATGCTGCT
CAACTGTATATGCATGGAAGACCATTGGCGAACAACAGTAAATGTGTCAAGGCCAATGCG
GGAGCCAAGAATTATGCTATTGTCATGCCTGATGCAAATGTTGAAGCTACTTTGAATGCT
CTAGTTGCTGCTGGTTTCGGAGCAGCAGGCCAACGCTGCACAACAATCAACATTGTGGTT
TTTGTTGGAGGCTCAAATTCATGGGAAGATAAACTAGCAGAACGTGCAAAGGCACTCAAA
GTAAATGCTGGAACTGAACCTGGTGCAGCCCTTGGACCAGTAATCAGCAAACAGGTCAGG
GAACATATATCCAAGCTAATCCAAGCAATTGTTGATAGTGGCGCAAGACTAGTTCTTGAT
GGGAGACAGATTGCGGTTTCCAAATATGAGTCGGGCAACTTCTTTGGTCCCACAATATTA
TCTGATGTCACAGAAGACATTGAATGTGCCAAGGAGGAAATACTAGGTCCCGTTCTTCTT
TGTATGCAGGCTAATAGCATAGATGAGGCCATTAACTTAGTGAACCAAAATAAAAAATAT
TGCAATGGAACATCTATCTTCACGGGCTCCGGGGCACTTGCGAGGAAATTCCAGATTGAG
ATCGAAACAAGGCAGGTTTGCATAAATGCTGCTGTTCCTGCTCCTCTTCCCCTCTTCTCT
CTCACATGCTCAGAGTTGTCTCTTGCTGGGGATATCAATGCCAATGGCAAAGCTGGTGTA
CAATTTTACACCCAAATAAAGACAGTGACTCAGCAATGGAAGGAGTTCAGTAGTGAAGGA
GGACTGCCACCCTTAACATCAAACTACCCCCAAAGTGATGATGGATTATCTCAGGGACTG
CAAGCTTTTGAATATCAGAGTGGCGCTGGTGATTATCAAAGTGGCGATGGTGTATCTGAG
GGATTACAATCTGTTGATTACCAGAGTGGTGGAGAACTGCTGGCGTTACATTCAAGGGAT
TTCTCAAATGGAGATGGAGTCCATCTGGCTTTACACCCAAAGGATTTCCCAGGAGGTAGT
GATGGTGAATCTCTGGGAGAACATTCAGGGGACATTTCAAGTGGTAATGGTATATCCCCA
ACAATACCAGTACCTGATGGATCACATTGGACATTGAACTTTTGA

Peptide Sequence

PEP ID

XP_016468913.1
PEP Infomation

PREDICTED: methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial-like isoform X3 [Nicotiana tabacum]
Sequence

MATEPSWRKRCPPRNPNLIGGRFVDSQSSASVDVLNPATQQVVSQVPLSTGEELKAAVFE
AKRAFPLWQHTPVTTRQRIMFKLQELIQRDIDKLAFAIATEQGKTLKDAYSEVQRGLEIV
ECACGGAALQTGEFVSNMSNGIDTFSIREPLGVCAGICPFTFPAMIPLWMFHVAISCGNT
YILKPSEKSPGACKILAELVLEAGLPNGVLNIIHGTNDIVNAICDDDDIEVVSFVGSDAA
QLYMHGRPLANNSKCVKANAGAKNYAIVMPDANVEATLNALVAAGFGAAGQRCTTINIVV
FVGGSNSWEDKLAERAKALKVNAGTEPGAALGPVISKQVREHISKLIQAIVDSGARLVLD
GRQIAVSKYESGNFFGPTILSDVTEDIECAKEEILGPVLLCMQANSIDEAINLVNQNKKY
CNGTSIFTGSGALARKFQIEIETRQVCINAAVPAPLPLFSLTCSELSLAGDINANGKAGV
QFYTQIKTVTQQWKEFSSEGGLPPLTSNYPQSDDGLSQGLQAFEYQSGAGDYQSGDGVSE
GLQSVDYQSGGELLALHSRDFSNGDGVHLALHPKDFPGGSDGESLGEHSGDISSGNGISP
TIPVPDGSHWTLNF

Transcript Sequence

Gene sequence data has not been registered.